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Version: Version 3.3 - Segmentation Support 🚧

Segmentation Service

Overview​

Using Segmentation Service you can create, edit and delete segmentation data, and change appearance of the segmentation including color, opacity, and visibility.

Segmentations in OHIF are based on the Segmentations in Cornerstone3D. You can read more about it in the Cornerstone Segmentation. OHIF currently only supports one representation of the segmentation data.

Events​

There are seven events that get publish in MeasurementService:

EventDescription
SEGMENTATION_UPDATEDFires when a segmentation is updated e.g., segment added, removed etc.
SEGMENTATION_DATA_MODIFIEDFires when the segmentation data changes
SEGMENTATION_ADDEDFires when a new segmentation is added to OHIF
SEGMENTATION_REMOVEDFires when a segmentation is removed from OHIF
SEGMENTATION_CONFIGURATION_CHANGEDFires when a segmentation configuration is changed
SEGMENT_PIXEL_DATA_CREATEDFires when a segment group adds its pixel data to the volume
SEGMENTATION_PIXEL_DATA_CREATEDFires when the full segmentation volume is filled with its segments

API​

Segmentation Creation​

  • createSegmentationForDisplaySet: based on a reference displaySet, create a new segmentation. E.g., create a new segmentation based on a CT series
  • createSegmentationForSEGDisplaySet: given a segDisplaySet loaded by a sopClassHandler, create a new segmentation
  • addSegmentationRepresentationToToolGroup: given the toolGroupId, add the given segmentationId to the toolGroup.

Segmentation Behavior​

  • setActiveSegmentationForToolGroup, getSegmentations, getSegmentation, jumpToSegmentCenter, highlightSegment

Segment Behavior​

  • setSegmentLockedForSegmentation, removeSegment, addSegment, setSegmentLockedForSegmentation, setSegmentLabel, setActiveSegmentForSegmentation, setSegmentRGBAColorForSegmentation

Segmentation Configuration​

Setters

  • setSegmentVisibility, setSegmentColor, setSegmentRGBA, setSegmentOpacity, toggleSegmentationVisibility,